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LOC119388376 zeta-sarcoglycan [ Rhipicephalus sanguineus (brown dog tick) ]

Gene ID: 119388376, updated on 27-Mar-2024

Summary

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Gene symbol
LOC119388376
Gene description
zeta-sarcoglycan
See related
VectorBase:RSAN_056943; EnsemblRapid:LOC119388376
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhipicephalus sanguineus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
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Genomic context

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See LOC119388376 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
101 current BIME_Rsan_1.4 (GCF_013339695.2) 3 NC_051178.1 (230887596..230899797)
100 previous assembly ASM1333969v1 (GCF_013339695.1) 3 NC_051178.1 (230857456..230899871)

Chromosome 3 - NC_051178.1Genomic Context describing neighboring genes Neighboring gene zeta-sarcoglycan-like Neighboring gene degenerin-like protein unc-105 Neighboring gene uncharacterized LOC125757925 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene transfer RNA serine (anticodon UGA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIME_Rsan_1.4

Genomic

  1. NC_051178.1 Reference BIME_Rsan_1.4

    Range
    230887596..230899797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037656081.2 → XP_037512009.1  zeta-sarcoglycan

    UniProtKB/TrEMBL
    A0A9D4T115
    Related
    XP_037512009.1, XM_037656081.2
    Conserved Domains (1) summary
    pfam04790
    Location:80 → 333
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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