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ClpX Caseinolytic protease chaperone subunit [ Rhipicephalus sanguineus (brown dog tick) ]

Gene ID: 119388271, updated on 6-Jul-2024

Summary

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Gene symbol
ClpX
Gene description
Caseinolytic protease chaperone subunit
See related
VectorBase:RSAN_044545; EnsemblRapid:LOC119388271
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhipicephalus sanguineus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
Orthologs
fruit fly all
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Genomic context

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See ClpX in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
101 current BIME_Rsan_1.4 (GCF_013339695.2) 3 NC_051178.1 (213843755..213916728)
100 previous assembly ASM1333969v1 (GCF_013339695.1) 3 NC_051178.1 (213843750..213916727)

Chromosome 3 - NC_051178.1Genomic Context describing neighboring genes Neighboring gene band 4.1-like protein 4 Neighboring gene RNA polymerase II subunit RpII18 Neighboring gene uncharacterized LOC119388274 Neighboring gene Iron-sulfur cluster assembly 1 homolog MagR

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIME_Rsan_1.4

Genomic

  1. NC_051178.1 Reference BIME_Rsan_1.4

    Range
    213843755..213916728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037655952.2 → XP_037511880.1  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

    Related
    XP_037511880.1, XM_037655952.2
    Conserved Domains (2) summary
    PRK05342
    Location:157 → 588
    clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
    cl02609
    Location:93 → 120
    Zn-ribbon; C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit
Nucleotide Protein
Heading Accession and Version

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