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LOC119383321 elongation of very long chain fatty acids protein AAEL008004 [ Rhipicephalus sanguineus (brown dog tick) ]

Gene ID: 119383321, updated on 27-Mar-2024

Summary

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Gene symbol
LOC119383321
Gene description
elongation of very long chain fatty acids protein AAEL008004
See related
VectorBase:RSAN_049281; EnsemblRapid:LOC119383321
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhipicephalus sanguineus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
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Genomic context

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See LOC119383321 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current BIME_Rsan_1.4 (GCF_013339695.2) 2 NC_051177.1 (87879381..87881538)
100 previous assembly ASM1333969v1 (GCF_013339695.1) 2 NC_051177.1 (87879398..87886971)

Chromosome 2 - NC_051177.1Genomic Context describing neighboring genes Neighboring gene elongation of very long chain fatty acids protein 7 Neighboring gene elongation of very long chain fatty acids protein AAEL008004 Neighboring gene elongation of very long chain fatty acids protein 7 Neighboring gene elongation of very long chain fatty acids protein AAEL008004

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation of very long chain fatty acids protein AAEL008004

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIME_Rsan_1.4

Genomic

  1. NC_051177.1 Reference BIME_Rsan_1.4

    Range
    87879381..87881538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037651400.2 → XP_037507328.1  elongation of very long chain fatty acids protein AAEL008004

    UniProtKB/TrEMBL
    A0A9D4Q864
    Related
    XP_037507328.1, XM_037651400.2
    Conserved Domains (1) summary
    pfam01151
    Location:38 → 263
    ELO; GNS1/SUR4 family
Nucleotide Protein
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