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CHST10 carbohydrate sulfotransferase 10 [ Talpa occidentalis (Iberian mole) ]

Gene ID: 119259264, updated on 21-Mar-2024

Summary

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Gene symbol
CHST10
Gene description
carbohydrate sulfotransferase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Talpa occidentalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa
Orthologs
human mouse all
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Genomic context

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See CHST10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current MPIMG_talOcc4v2.1 (GCF_014898055.3) Unplaced Scaffold NW_023604861.1 (101240231..101262869, complement)

NW_023604861.1Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene LON peptidase N-terminal domain and ring finger 2 Neighboring gene phosducin like 3 Neighboring gene uncharacterized LOC129146912

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023604861 Unplaced Scaffold Reference MPIMG_talOcc4v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014898055.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPIMG_talOcc4v2.1 Primary Assembly

Genomic

  1. NW_023604861.1 Reference MPIMG_talOcc4v2.1 Primary Assembly

    Range
    101240231..101262869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037527970.2 → XP_037383867.1  carbohydrate sulfotransferase 10

    Conserved Domains (1) summary
    pfam03567
    Location:141 → 373
    Sulfotransfer_2; Sulfotransferase family

  2. XM_037527969.2 → XP_037383866.1  carbohydrate sulfotransferase 10

    Conserved Domains (1) summary
    pfam03567
    Location:141 → 373
    Sulfotransfer_2; Sulfotransferase family

  3. XM_037527971.2 → XP_037383868.1  carbohydrate sulfotransferase 10

    Conserved Domains (1) summary
    pfam03567
    Location:141 → 373
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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