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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Talpa occidentalis (Iberian mole) ]

Gene ID: 119240835, updated on 21-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Talpa occidentalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current MPIMG_talOcc4v2.1 (GCF_014898055.3) Unplaced Scaffold NW_023601212.1 (25009855..25551988, complement)

NW_023601212.1Genomic Context describing neighboring genes Neighboring gene decapping enzyme, scavenger Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene uncharacterized LOC119240837 Neighboring gene uncharacterized LOC119239953 Neighboring gene uncharacterized LOC119239954

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023601212 Unplaced Scaffold Reference MPIMG_talOcc4v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014898055.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPIMG_talOcc4v2.1 Primary Assembly

Genomic

  1. NW_023601212.1 Reference MPIMG_talOcc4v2.1 Primary Assembly

    Range
    25009855..25551988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054693197.1 → XP_054549172.1  kin of IRRE-like protein 3 isoform X2

  2. XM_054693195.1 → XP_054549170.1  kin of IRRE-like protein 3 isoform X1

  3. XM_054693198.1 → XP_054549173.1  kin of IRRE-like protein 3 isoform X3

  4. XM_054693196.1 → XP_054549171.1  kin of IRRE-like protein 3 isoform X1

  5. XM_037505606.2 → XP_037361503.1  kin of IRRE-like protein 3 isoform X4

    Conserved Domains (4) summary
    cd00096
    Location:212 → 216
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:18 → 115
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:287 → 384
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:204 → 285
    Ig; Immunoglobulin domain
Nucleotide Protein
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