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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119230182, updated on 21-Mar-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 4 NC_084903.1 (24895465..24920965, complement)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616456.1 (23026226..23033578, complement)

Chromosome 4 - NC_084903.1Genomic Context describing neighboring genes Neighboring gene stathmin-4-like Neighboring gene GPN-loop GTPase 1 Neighboring gene para-nitrobenzyl esterase Neighboring gene USP6 N-terminal-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyl- and glucuronyltransferase LARGE2s

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084903.1 Reference fPunPun2.1

    Range
    24895465..24920965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062561947.1 → XP_062417931.1  xylosyl- and glucuronyltransferase LARGE2s

  2. XM_062561945.1 → XP_062417929.1  xylosyl- and glucuronyltransferase LARGE2s

  3. XM_062561946.1 → XP_062417930.1  xylosyl- and glucuronyltransferase LARGE2s

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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