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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119227263, updated on 21-Mar-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 4 NC_084903.1 (3435876..3481429, complement)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616456.1 (3193343..3232178, complement)

Chromosome 4 - NC_084903.1Genomic Context describing neighboring genes Neighboring gene MTSS I-BAR domain containing 2b Neighboring gene neural-cadherin Neighboring gene uncharacterized LOC134127320 Neighboring gene zinc finger protein 507

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084903.1 Reference fPunPun2.1

    Range
    3435876..3481429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037485902.2 → XP_037341799.2  probable C-mannosyltransferase DPY19L3 isoform X2

  2. XM_037485893.2 → XP_037341790.2  probable C-mannosyltransferase DPY19L3 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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