lig4 ligase IV, DNA, ATP-dependent [Pungitius pungitius (ninespine stickleback)] - Gene

Summary

Gene symbol: lig4
Gene description: ligase IV, DNA, ATP-dependent
Gene type: protein coding
RefSeq status: MODEL
Organism: Pungitius pungitius
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
Orthologs: human zebrafish all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_01	current	fPunPun2.1 (GCF_949316345.1)	3	NC_084902.1 (24198355..24207508)
100	previous assembly	NSP_V7 (GCF_902500615.1)	Unplaced Scaffold	NW_023616455.1 (6625453..6634553, complement)

Chromosome 3 - NC_084902.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables DNA ligase (ATP) activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in DNA biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in DNA ligation involved in DNA repair	IEA Inferred from Electronic Annotation more info	PubMed
involved_in double-strand break repair via nonhomologous end joining	IEA Inferred from Electronic Annotation more info	PubMed
involved_in immunoglobulin V(D)J recombination	IEA Inferred from Electronic Annotation more info	PubMed
involved_in nucleotide-excision repair, DNA gap filling	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of DNA ligase IV complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of DNA-dependent protein kinase-DNA ligase 4 complex	IEA Inferred from Electronic Annotation more info	PubMed