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LOC119216738 torsin-1A-interacting protein 2-like [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119216738, updated on 31-Jan-2024

Summary

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Gene symbol
LOC119216738
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
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Genomic context

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See LOC119216738 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 7 NC_084906.1 (18011796..18015565, complement)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616462.1 (16088160..16091861, complement)

Chromosome 7 - NC_084906.1Genomic Context describing neighboring genes Neighboring gene retinoid X receptor, gamma b Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene uncharacterized LOC119216643 Neighboring gene chemokine (C motif) receptor 1a, duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084906.1 Reference fPunPun2.1

    Range
    18011796..18015565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062563448.1 → XP_062419432.1  torsin-1A-interacting protein 2-like isoform X2

  2. XM_062563449.1 → XP_062419433.1  torsin-1A-interacting protein 2-like isoform X3

  3. XM_062563452.1 → XP_062419436.1  torsin-1A-interacting protein 2-like isoform X6

  4. XM_062563451.1 → XP_062419435.1  torsin-1A-interacting protein 2-like isoform X5

  5. XM_062563450.1 → XP_062419434.1  torsin-1A-interacting protein 2-like isoform X4

  6. XM_062563446.1 → XP_062419430.1  torsin-1A-interacting protein 2-like isoform X1

  7. XM_062563447.1 → XP_062419431.1  torsin-1A-interacting protein 2-like isoform X1

Nucleotide Protein
Heading Accession and Version

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