U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC119215623 adapter molecule crk-like [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119215623, updated on 1-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
LOC119215623
Gene description
adapter molecule crk-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC119215623 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 16 NC_084915.1 (15867935..15873498)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616461.1 (14408080..14413648)

Chromosome 16 - NC_084915.1Genomic Context describing neighboring genes Neighboring gene TLC domain containing 3A Neighboring gene smoothelin-like protein 2 Neighboring gene 14-3-3 protein epsilon Neighboring gene glutamate receptor 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
adapter molecule crk-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084915.1 Reference fPunPun2.1

    Range
    15867935..15873498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037467913.2 → XP_037323810.1  adapter molecule crk-like

    Conserved Domains (3) summary
    cd09926
    Location:5 → 115
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:135 → 189
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cd11759
    Location:249 → 305
    SH3_CRK_C; C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases