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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119195078, updated on 21-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 20 NC_084919.1 (12513950..12546488)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616472.1 (12794459..12825768)

Chromosome 20 - NC_084919.1Genomic Context describing neighboring genes Neighboring gene SAYSvFN domain-containing protein 1 Neighboring gene 3'(2'),5'-bisphosphate nucleotidase 1 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene glycoprotein integral membrane 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084919.1 Reference fPunPun2.1

    Range
    12513950..12546488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037449692.2 → XP_037305589.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  2. XM_037449694.2 → XP_037305591.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

  3. XM_037449695.2 → XP_037305592.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

  4. XM_037449693.2 → XP_037305590.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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