U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

slc25a20 solute carrier family 25 member 20 [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119193900, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See slc25a20 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 8 NC_084907.1 (22381284..22385125)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616471.1 (94009..97871, complement)

Chromosome 8 - NC_084907.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor Neighboring gene NCK-interacting protein with SH3 domain-like Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha, B Neighboring gene msx2-interacting protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084907.1 Reference fPunPun2.1

    Range
    22381284..22385125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037447807.2 → XP_037303704.1  mitochondrial carnitine/acylcarnitine carrier protein

    Conserved Domains (1) summary
    pfam00153
    Location:107 → 197
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.