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LOC119181775 prolyl 3-hydroxylase 2-like [ Rhipicephalus microplus (southern cattle tick) ]

Gene ID: 119181775, updated on 26-Mar-2024

Summary

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Gene symbol
LOC119181775
Gene description
prolyl 3-hydroxylase 2-like
See related
VectorBase:LOC119181775; EnsemblRapid:LOC119181775
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhipicephalus microplus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Boophilus
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Genomic context

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See LOC119181775 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1333972v1 (GCF_013339725.1) 11 NC_051175.1 (97486994..97515673, complement)

Chromosome 11 - NC_051175.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 525-like Neighboring gene ephrin-B2a-like Neighboring gene sphingomyelin synthase-related protein 1-like Neighboring gene target of EGR1 protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051175.1 Chromosome 11 Reference ASM1333972v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhipicephalus microplus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1333972v1 Primary Assembly

Genomic

  1. NC_051175.1 Reference ASM1333972v1 Primary Assembly

    Range
    97486994..97515673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037433016.1 → XP_037288913.1  prolyl 3-hydroxylase 2-like

    Related
    XP_037288913.1, XM_037433016.1
    Conserved Domains (2) summary
    smart00702
    Location:399 → 596
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    COG0457
    Location:125 → 314
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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