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LOC119167859 carbohydrate sulfotransferase 11-like [ Rhipicephalus microplus (southern cattle tick) ]

Gene ID: 119167859, updated on 26-Mar-2024

Summary

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Gene symbol
LOC119167859
Gene description
carbohydrate sulfotransferase 11-like
See related
VectorBase:LOC119167859; EnsemblRapid:LOC119167859
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhipicephalus microplus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Boophilus
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Genomic context

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See LOC119167859 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1333972v1 (GCF_013339725.1) 1 NC_051165.1 (7915008..7916799, complement)

Chromosome 1 - NC_051165.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119167803 Neighboring gene uncharacterized LOC119167821 Neighboring gene proline dehydrogenase slgA Neighboring gene uncharacterized LOC119159814 Neighboring gene thioredoxin-related transmembrane protein 2 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051165.1 Chromosome 1 Reference ASM1333972v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhipicephalus microplus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1333972v1 Primary Assembly

Genomic

  1. NC_051165.1 Reference ASM1333972v1 Primary Assembly

    Range
    7915008..7916799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037419358.1 → XP_037275255.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A9J6F217
    Related
    XP_037275255.1, XM_037419358.1
    Conserved Domains (1) summary
    pfam03567
    Location:79 → 312
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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