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ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma [ Syngnathus acus (greater pipefish) ]

Gene ID: 119115796, updated on 21-Mar-2024

Summary

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Gene symbol
ppp2r3c
Gene description
protein phosphatase 2, regulatory subunit B'', gamma
See related
EnsemblRapid:ENSSACG00010020915
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus acus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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See ppp2r3c in Genome Data Viewer
Location:
chromosome: 22
Exon count:
17
Annotation release Status Assembly Chr Location
100 current fSynAcu1.2 (GCF_901709675.1) 22 NC_051106.1 (10294493..10301233, complement)

Chromosome 22 - NC_051106.1Genomic Context describing neighboring genes Neighboring gene calmodulin-A-like Neighboring gene tetratricopeptide repeat domain 7B Neighboring gene family with sequence similarity 177 member A1 Neighboring gene nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b Neighboring gene insulinoma-associated protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051106.1 Chromosome 22 Reference fSynAcu1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of B cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Syngnathus acus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSynAcu1.2

Genomic

  1. NC_051106.1 Reference fSynAcu1.2

    Range
    10294493..10301233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037240593.1 → XP_037096488.1  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1

    Conserved Domains (1) summary
    cd21505
    Location:80 → 460
    PPP2R3C; serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma

  2. XM_037240594.1 → XP_037096489.1  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1

    Related
    ENSSACP00010030351.1, ENSSACT00010033811.1
    Conserved Domains (1) summary
    cd21505
    Location:80 → 460
    PPP2R3C; serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma

  3. XM_037240595.1 → XP_037096490.1  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1

    Conserved Domains (1) summary
    cd21505
    Location:80 → 460
    PPP2R3C; serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma

  4. XM_037240596.1 → XP_037096491.1  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X2

    Related
    ENSSACP00010030349.1, ENSSACT00010033809.1
    Conserved Domains (1) summary
    cd21505
    Location:58 → 438
    PPP2R3C; serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma
Nucleotide Protein
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