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LOC119102666 E3 ubiquitin-protein ligase CBL-B-B-like [ Pollicipes pollicipes ]

Gene ID: 119102666, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119102666
Gene description
E3 ubiquitin-protein ligase CBL-B-B-like
See related
EnsemblRapid:LOC119102666
Gene type
protein coding
RefSeq status
MODEL
Organism
Pollicipes pollicipes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Cirripedia; Thoracica; Thoracicalcarea; Pollicipedomorpha; Pollicipedidae; Pollicipes
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Genomic context

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See LOC119102666 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Ppol_2 (GCF_011947565.2) Unplaced Scaffold NW_023596136.1 (46673439..46686739, complement)

NW_023596136.1Genomic Context describing neighboring genes Neighboring gene peroxiredoxin-5, mitochondrial-like Neighboring gene vang-like protein 2-B Neighboring gene molybdenum cofactor biosynthesis protein 1-like Neighboring gene molybdenum cofactor biosynthesis protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023596136 Unplaced Scaffold Reference Ppol_2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-B-B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pollicipes pollicipes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppol_2

Genomic

  1. NW_023596136.1 Reference Ppol_2

    Range
    46673439..46686739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037226128.1 → XP_037082023.1  E3 ubiquitin-protein ligase CBL-B-B-like

    Related
    XP_037082023.1, XM_037226128.1
    Conserved Domains (4) summary
    cd09920
    Location:265 → 361
    SH2_Cbl-b_TKB; Src homology 2 (SH2) domain found in the Cbl-b TKB domain
    cd16709
    Location:371 → 436
    RING-HC_Cbl-b; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Cbl-b and similar proteins
    pfam02262
    Location:64 → 179
    Cbl_N; CBL proto-oncogene N-terminal domain 1
    pfam02761
    Location:188 → 271
    Cbl_N2; CBL proto-oncogene N-terminus, EF hand-like domain
Nucleotide Protein
Heading Accession and Version

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