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Hcf Host cell factor [ Bradysia coprophila ]

Gene ID: 119075450, updated on 24-May-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Bradysia coprophila
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Sciaroidea; Sciaridae; Bradysia
Orthologs
fruit fly all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: III
Exon count:
11
Annotation release Status Assembly Chr Location
100 current BU_Bcop_v1 (GCF_014529535.1) III NC_050736.1 (3818481..3828017, complement)

Chromosome III - NC_050736.1Genomic Context describing neighboring genes Neighboring gene trypsin-7-like Neighboring gene uncharacterized LOC119078279 Neighboring gene synaptophysin-like Neighboring gene major facilitator superfamily domain-containing protein 12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_050736.1 Chromosome III Reference BU_Bcop_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1; host cell factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bradysia coprophila Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BU_Bcop_v1

Genomic

  1. NC_050736.1 Reference BU_Bcop_v1

    Range
    3818481..3828017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037181901.1 → XP_037037796.1  host cell factor isoform X2

    Conserved Domains (3) summary
    PLN02193
    Location:7 → 309
    PLN02193; nitrile-specifier protein
    cd00063
    Location:1281 → 1383
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:187 → 238
    Kelch; KELCH repeat [structural motif]

  2. XM_037181892.1 → XP_037037787.1  host cell factor 1 isoform X1

    Conserved Domains (3) summary
    PLN02193
    Location:7 → 309
    PLN02193; nitrile-specifier protein
    cd00063
    Location:1283 → 1385
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:187 → 238
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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