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LOC119073799 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Bradysia coprophila ]

Gene ID: 119073799, updated on 10-May-2024

Summary

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Gene symbol
LOC119073799
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Bradysia coprophila
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Sciaroidea; Sciaridae; Bradysia
Orthologs
fruit fly all
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Genomic context

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See LOC119073799 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Annotation release Status Assembly Chr Location
100 current BU_Bcop_v1 (GCF_014529535.1) II NC_050735.1 (12650313..12735150, complement)

Chromosome II - NC_050735.1Genomic Context describing neighboring genes Neighboring gene protein tramtrack Neighboring gene N-glycosylase/DNA lyase-like Neighboring gene odorant receptor 94b-like Neighboring gene pickpocket protein 28-like Neighboring gene PBX homeobox extradenticle

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_050735.1 Chromosome II Reference BU_Bcop_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bradysia coprophila Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BU_Bcop_v1

Genomic

  1. NC_050735.1 Reference BU_Bcop_v1

    Range
    12650313..12735150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037179607.1 → XP_037035502.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_037179571.1 → XP_037035466.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_037179590.1 → XP_037035485.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_037179542.1 → XP_037035437.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  5. XM_037179617.1 → XP_037035512.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  6. XM_037179553.1 → XP_037035448.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  7. XM_037179598.1 → XP_037035493.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  8. XM_037179561.1 → XP_037035456.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  9. XM_037179581.1 → XP_037035476.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:192 → 422
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein Strain
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