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shams glucoside xylosyltransferase 1 shams [ Bradysia coprophila ]

Gene ID: 119068252, updated on 22-May-2024

Summary

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Gene symbol
shams
Gene description
glucoside xylosyltransferase 1 shams
Gene type
protein coding
RefSeq status
MODEL
Organism
Bradysia coprophila
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Sciaroidea; Sciaridae; Bradysia
Orthologs
fruit fly all
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Genomic context

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See shams in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
100 current BU_Bcop_v1 (GCF_014529535.1) X Unlocalized Scaffold NW_023503302.1 (4526812..4529520)

NW_023503302.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119068241 Neighboring gene uncharacterized LOC119068273 Neighboring gene DNA polymerase iota Neighboring gene uncharacterized LOC119068261

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023503302 Chromosome X Unlocalized Scaffold Reference BU_Bcop_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bradysia coprophila Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BU_Bcop_v1

Genomic

  1. NW_023503302.1 Reference BU_Bcop_v1

    Range
    4526812..4529520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037171790.1 → XP_037027685.1  glucoside xylosyltransferase 2

    Conserved Domains (1) summary
    cl11394
    Location:66 → 360
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases