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LOC119067675 irregular chiasm C-roughest protein-like [ Bradysia coprophila ]

Gene ID: 119067675, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119067675
Gene description
irregular chiasm C-roughest protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bradysia coprophila
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Sciaroidea; Sciaridae; Bradysia
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Genomic context

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See LOC119067675 in Genome Data Viewer
Location:
chromosome: X
Exon count:
13
Annotation release Status Assembly Chr Location
100 current BU_Bcop_v1 (GCF_014529535.1) X Unlocalized Scaffold NW_023503295.1 (662643..772232)

NW_023503295.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119067703 Neighboring gene uncharacterized LOC119067691 Neighboring gene uncharacterized LOC119067704 Neighboring gene uncharacterized LOC119067671 Neighboring gene uncharacterized LOC119067701

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023503295 Chromosome X Unlocalized Scaffold Reference BU_Bcop_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bradysia coprophila Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BU_Bcop_v1

Genomic

  1. NW_023503295.1 Reference BU_Bcop_v1

    Range
    662643..772232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037170788.1 → XP_037026683.1  irregular chiasm C-roughest protein-like

    Conserved Domains (5) summary
    pfam07686
    Location:24 → 121
    V-set; Immunoglobulin V-set domain
    pfam08205
    Location:127 → 214
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:409 → 492
    Ig_3; Immunoglobulin domain
    cd00096
    Location:127 → 130
    Ig; Ig strand A [structural motif]
    cl11960
    Location:245 → 316
    Ig; Immunoglobulin domain

  2. XM_037170789.1 → XP_037026684.1  irregular chiasm C-roughest protein-like

    Conserved Domains (5) summary
    pfam07686
    Location:24 → 121
    V-set; Immunoglobulin V-set domain
    pfam08205
    Location:127 → 214
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:409 → 492
    Ig_3; Immunoglobulin domain
    cd00096
    Location:127 → 130
    Ig; Ig strand A [structural motif]
    cl11960
    Location:245 → 316
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

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