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Tmtc2 Transmembrane O-mannosyltransferase targeting cadherins 2 [ Bradysia coprophila ]

Gene ID: 119066147, updated on 15-May-2024

Summary

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Gene symbol
Tmtc2
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Bradysia coprophila
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Sciaroidea; Sciaridae; Bradysia
Orthologs
fruit fly all
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Genomic context

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See Tmtc2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
12
Annotation release Status Assembly Chr Location
100 current BU_Bcop_v1 (GCF_014529535.1) IV NC_050738.1 (10112784..10186044)

Chromosome IV - NC_050738.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119066161 Neighboring gene uncharacterized LOC119066152 Neighboring gene uncharacterized LOC119066158 Neighboring gene probable glucan endo-1,3-beta-glucosidase ARB_02077 Neighboring gene uncharacterized LOC119066160 Neighboring gene uncharacterized LOC119066029 Neighboring gene uncharacterized LOC119066164

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_050738.1 Chromosome IV Reference BU_Bcop_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bradysia coprophila Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BU_Bcop_v1

Genomic

  1. NC_050738.1 Reference BU_Bcop_v1

    Range
    10112784..10186044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037168442.1 → XP_037024337.1  protein O-mannosyl-transferase TMTC2

    Conserved Domains (3) summary
    TIGR02917
    Location:525 → 865
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:537 → 565
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:253 → 320
    DUF1736; Domain of unknown function (DUF1736)

  2. XM_037168443.1 → XP_037024338.1  protein O-mannosyl-transferase TMTC2

    Conserved Domains (3) summary
    TIGR02917
    Location:525 → 865
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:537 → 565
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:253 → 320
    DUF1736; Domain of unknown function (DUF1736)

  3. XM_037168444.1 → XP_037024339.1  protein O-mannosyl-transferase TMTC2

    Conserved Domains (3) summary
    TIGR02917
    Location:525 → 865
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:537 → 565
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:253 → 320
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein Strain
Heading Accession and Version

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