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SHARPIN SHANK associated RH domain interactor [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

Gene ID: 119064715, updated on 30-Mar-2024

Summary

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Gene symbol
SHARPIN
Gene description
SHANK associated RH domain interactor
See related
EnsemblRapid:ENSAJMG00005005486
Gene type
protein coding
RefSeq status
MODEL
Organism
Artibeus jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
Orthologs
human mouse all
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Genomic context

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See SHARPIN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026522059.1 (483366..487788)

NW_026522059.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 97 Neighboring gene MAF1 homolog, negative regulator of RNA polymerase III Neighboring gene cytochrome c1, heme protein, mitochondrial Neighboring gene glycosylphosphatidylinositol anchor attachment 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026522059 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein linear polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of LUBAC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sharpin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Jam_final Primary Assembly

Genomic

  1. NW_026522059.1 Reference CSHL_Jam_final Primary Assembly

    Range
    483366..487788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037166570.2 → XP_037022465.1  sharpin

    Related
    ENSAJMP00005007866.1
    Conserved Domains (4) summary
    smart00547
    Location:343 → 364
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:343 → 362
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cd01799
    Location:216 → 294
    Ubl_HOIL1; ubiquitin-like (Ubl) domain found in heme-oxidized IRP2 ubiquitin ligase 1 (HOIL-1) and similar proteins
    pfam16764
    Location:14 → 126
    Sharpin_PH; Sharpin PH domain
Nucleotide Protein
Heading Accession and Version

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