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TAP2 transporter 2, ATP binding cassette subfamily B member [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

Gene ID: 119049937, updated on 30-Mar-2024

Summary

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Gene symbol
TAP2
Gene description
transporter 2, ATP binding cassette subfamily B member
See related
EnsemblRapid:ENSAJMG00005015487
Gene type
protein coding
RefSeq status
MODEL
Organism
Artibeus jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
Orthologs
human mouse all
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Genomic context

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See TAP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521902.1 (3215313..3228220)

NW_026521902.1Genomic Context describing neighboring genes Neighboring gene transporter 1, ATP binding cassette subfamily B member Neighboring gene proteasome 20S subunit beta 8 Neighboring gene 40S ribosomal protein S27-like Neighboring gene HLA class II histocompatibility antigen, DQ beta 1 chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026521902 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type oligopeptide transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MHC protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TAP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
antigen peptide transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Jam_final Primary Assembly

Genomic

  1. NW_026521902.1 Reference CSHL_Jam_final Primary Assembly

    Range
    3215313..3228220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037146061.2 → XP_037001956.2  antigen peptide transporter 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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