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TANK TRAF family member associated NFKB activator [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

Gene ID: 119045646, updated on 30-Mar-2024

Summary

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Gene symbol
TANK
Gene description
TRAF family member associated NFKB activator
See related
EnsemblRapid:ENSAJMG00005012028
Gene type
protein coding
RefSeq status
MODEL
Organism
Artibeus jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
Orthologs
human mouse all
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Genomic context

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See TANK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521814.1 (534418..624674)

NW_026521814.1Genomic Context describing neighboring genes Neighboring gene nascent polypeptide-associated complex subunit alpha-like Neighboring gene uncharacterized LOC119045668 Neighboring gene thioredoxin domain-containing protein 9-like Neighboring gene protein LSM12-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026521814 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Jam_final Primary Assembly

Genomic

  1. NW_026521814.1 Reference CSHL_Jam_final Primary Assembly

    Range
    534418..624674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037140412.2 → XP_036996307.1  TRAF family member-associated NF-kappa-B activator isoform X1

    Related
    ENSAJMP00005017205.1
    Conserved Domains (1) summary
    pfam12845
    Location:133 → 186
    TBD; TBD domain

  2. XM_037140411.2 → XP_036996306.1  TRAF family member-associated NF-kappa-B activator isoform X1

    Conserved Domains (1) summary
    pfam12845
    Location:133 → 186
    TBD; TBD domain

  3. XM_037140413.2 → XP_036996308.1  TRAF family member-associated NF-kappa-B activator isoform X2

    Related
    ENSAJMP00005017314.1
    Conserved Domains (1) summary
    pfam12845
    Location:132 → 185
    TBD; TBD domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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