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HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

Gene ID: 119044532, updated on 30-Mar-2024

Summary

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Gene symbol
HOGA1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
See related
EnsemblRapid:ENSAJMG00005017614
Gene type
protein coding
RefSeq status
MODEL
Organism
Artibeus jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
Orthologs
human mouse all
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Genomic context

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See HOGA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521538.1 (2043436..2066385)

NW_026521538.1Genomic Context describing neighboring genes Neighboring gene ubiquitin domain containing 1 Neighboring gene ankyrin repeat domain 2 Neighboring gene chromosome unknown C10orf62 homolog Neighboring gene MORN repeat containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026521538 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Jam_final Primary Assembly

Genomic

  1. NW_026521538.1 Reference CSHL_Jam_final Primary Assembly

    Range
    2043436..2066385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037138951.2 → XP_036994846.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2

    Conserved Domains (1) summary
    cd00408
    Location:38 → 279
    DHDPS-like; Dihydrodipicolinate synthase family

  2. XM_037138952.2 → XP_036994847.2  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X3

  3. XM_053662458.1 → XP_053518433.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X4

  4. XM_037138949.2 → XP_036994844.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1

    Related
    ENSAJMP00005025379.1
    Conserved Domains (1) summary
    cd00408
    Location:38 → 321
    DHDPS-like; Dihydrodipicolinate synthase family
Nucleotide Protein
Heading Accession and Version

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