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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

Gene ID: 119043141, updated on 30-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSAJMG00005016888
Gene type
protein coding
RefSeq status
MODEL
Organism
Artibeus jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521852.1 (7814715..7938452, complement)

NW_026521852.1Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase KAT7-like Neighboring gene small integral membrane protein 42 Neighboring gene uncharacterized LOC119043143 Neighboring gene proteasome subunit alpha type-6-like Neighboring gene myb-related protein B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026521852 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Jam_final Primary Assembly

Genomic

  1. NW_026521852.1 Reference CSHL_Jam_final Primary Assembly

    Range
    7814715..7938452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053667989.1 → XP_053523964.1  kin of IRRE-like protein 1 isoform X6

  2. XM_053667991.1 → XP_053523966.1  kin of IRRE-like protein 1 isoform X8

  3. XM_053667990.1 → XP_053523965.1  kin of IRRE-like protein 1 isoform X7

  4. XM_037137033.2 → XP_036992928.1  kin of IRRE-like protein 1 isoform X1

    Conserved Domains (5) summary
    pfam13927
    Location:315 → 380
    Ig_3; Immunoglobulin domain
    cd00096
    Location:332 → 336
    Ig; Ig strand B [structural motif]
    cd05759
    Location:129 → 226
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:398 → 495
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:29 → 123
    Ig; Immunoglobulin domain

  5. XM_053667992.1 → XP_053523967.1  kin of IRRE-like protein 1 isoform X10

  6. XM_053667986.1 → XP_053523961.1  kin of IRRE-like protein 1 isoform X2

  7. XM_037137039.2 → XP_036992934.1  kin of IRRE-like protein 1 isoform X9

    Related
    ENSAJMP00005024354.1
    Conserved Domains (5) summary
    pfam13927
    Location:247 → 312
    Ig_3; Immunoglobulin domain
    cd00096
    Location:264 → 268
    Ig; Ig strand B [structural motif]
    cd05759
    Location:61 → 158
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:330 → 427
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:162 → 243
    Ig; Immunoglobulin domain

  8. XM_053667988.1 → XP_053523963.1  kin of IRRE-like protein 1 isoform X4

  9. XM_037137036.2 → XP_036992931.1  kin of IRRE-like protein 1 isoform X5

    Related
    ENSAJMP00005024646.1
    Conserved Domains (5) summary
    pfam13927
    Location:302 → 367
    Ig_3; Immunoglobulin domain
    cd00096
    Location:319 → 323
    Ig; Ig strand B [structural motif]
    cd05759
    Location:116 → 213
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:385 → 482
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:16 → 110
    Ig; Immunoglobulin domain

  10. XM_037137035.2 → XP_036992930.1  kin of IRRE-like protein 1 isoform X3

    Conserved Domains (5) summary
    pfam13927
    Location:307 → 372
    Ig_3; Immunoglobulin domain
    cd00096
    Location:324 → 328
    Ig; Ig strand B [structural motif]
    cd05759
    Location:121 → 218
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:390 → 487
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:21 → 115
    Ig; Immunoglobulin domain
Nucleotide Protein
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