U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC119028781 torsin-1A-interacting protein 2-like [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119028781, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC119028781
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSALTG00010013671
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC119028781 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 11 NC_051049.1 (12262693..12267083)

Chromosome 11 - NC_051049.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 160-like Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6 Neighboring gene uncharacterized LOC119028785

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_051049.1 Chromosome 11 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051049.1 Reference fAcaLat1.1 Primary Assembly

    Range
    12262693..12267083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037115047.1 → XP_036970942.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSALTP00010036412.1, ENSALTT00010039183.1
    Conserved Domains (1) summary
    pfam05609
    Location:36 → 476
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_037115048.1 → XP_036970943.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:36 → 475
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases