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pofut1 protein O-fucosyltransferase 1 [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119022653, updated on 21-Mar-2024

Summary

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Gene symbol
pofut1
Gene description
protein O-fucosyltransferase 1
See related
EnsemblRapid:ENSALTG00010000626
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
human zebrafish all
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Genomic context

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See pofut1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 7 NC_051045.1 (30344467..30351097, complement)

Chromosome 7 - NC_051045.1Genomic Context describing neighboring genes Neighboring gene protein-L-isoaspartate O-methyltransferase domain-containing protein 2 Neighboring gene kinesin family member 3B Neighboring gene uncharacterized LOC119023172 Neighboring gene pleiomorphic adenoma gene-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051045.1 Chromosome 7 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051045.1 Reference fAcaLat1.1 Primary Assembly

    Range
    30344467..30351097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037103777.1 → XP_036959672.1  GDP-fucose protein O-fucosyltransferase 1

    Related
    ENSALTP00010000459.1, ENSALTT00010000959.1
    Conserved Domains (1) summary
    cd11302
    Location:34 → 383
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
Heading Accession and Version

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