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tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119020932, updated on 21-Mar-2024

Summary

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Gene symbol
tab1
Gene description
TGF-beta activated kinase 1/MAP3K7 binding protein 1
See related
EnsemblRapid:ENSALTG00010010288
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
human zebrafish all
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Genomic context

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See tab1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 1 NC_051039.1 (4531154..4550872)

Chromosome 1 - NC_051039.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin-1-like Neighboring gene intraflagellar transport 27 homolog (Chlamydomonas) Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b Neighboring gene uncharacterized LOC119015224

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051039.1 Chromosome 1 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051039.1 Reference fAcaLat1.1 Primary Assembly

    Range
    4531154..4550872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037100745.1 → XP_036956640.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    Related
    ENSALTP00010026771.1, ENSALTT00010029530.1
    Conserved Domains (1) summary
    cd00143
    Location:34 → 314
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_037100755.1 → XP_036956650.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X3

    Related
    ENSALTP00010026759.1, ENSALTT00010029519.1
    Conserved Domains (1) summary
    cd00143
    Location:34 → 305
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. XM_037100736.1 → XP_036956631.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Related
    ENSALTP00010026855.1, ENSALTT00010029614.1
    Conserved Domains (1) summary
    cd00143
    Location:34 → 314
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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