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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119012337, updated on 21-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
See related
EnsemblRapid:ENSALTG00010003048
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 22 NC_051060.1 (595960..656556, complement)

Chromosome 22 - NC_051060.1Genomic Context describing neighboring genes Neighboring gene glycoprotein integral membrane 1 Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene cyclin-dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051060.1 Chromosome 22 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051060.1 Reference fAcaLat1.1 Primary Assembly

    Range
    595960..656556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037086055.1 → XP_036941950.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (3) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_037086054.1 → XP_036941949.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Related
    ENSALTP00010006134.1, ENSALTT00010007583.1
    Conserved Domains (3) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_037086058.1 → XP_036941953.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    Related
    ENSALTP00010006135.1, ENSALTT00010007584.1
    Conserved Domains (4) summary
    smart00547
    Location:702 → 725
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:395 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:703 → 722
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_037086057.1 → XP_036941952.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    Conserved Domains (3) summary
    smart00547
    Location:729 → 752
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:730 → 749
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  5. XM_037086056.1 → XP_036941951.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Related
    ENSALTP00010006133.1, ENSALTT00010007582.1
    Conserved Domains (3) summary
    smart00547
    Location:734 → 757
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:735 → 754
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
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