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sgca sarcoglycan, alpha [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119009858, updated on 21-Mar-2024

Summary

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Gene symbol
sgca
Gene description
sarcoglycan, alpha
See related
EnsemblRapid:ENSALTG00010002142
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
zebrafish all
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Genomic context

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See sgca in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 20 NC_051058.1 (21266032..21269844, complement)

Chromosome 20 - NC_051058.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119010186 Neighboring gene collagen, type I, alpha 1b Neighboring gene neurabin-2-like Neighboring gene PR domain containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051058.1 Chromosome 20 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051058.1 Reference fAcaLat1.1 Primary Assembly

    Range
    21266032..21269844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037081554.1 → XP_036937449.1  alpha-sarcoglycan

    Related
    ENSALTP00010003997.1, ENSALTT00010005077.1
    Conserved Domains (1) summary
    pfam05510
    Location:38 → 376
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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