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NGLY1 N-glycanase 1 [ Sturnira hondurensis ]

Gene ID: 119004110, updated on 30-Mar-2024

Summary

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Gene symbol
NGLY1
Gene description
N-glycanase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See NGLY1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023526130.1 (4946458..4990195, complement)

NW_023526130.1Genomic Context describing neighboring genes Neighboring gene retinoic acid receptor beta Neighboring gene uncharacterized LOC119004032 Neighboring gene DNA topoisomerase II beta Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial Neighboring gene small nucleolar RNA SNORA25 Neighboring gene 60S ribosomal protein L15-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023526130 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023526130.1 Reference WHU_Shon_v2.1

    Range
    4946458..4990195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037070861.1 → XP_036926756.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X2

    Conserved Domains (4) summary
    cd10459
    Location:17 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    pfam01841
    Location:277 → 356
    Transglut_core; Transglutaminase-like superfamily
    pfam04721
    Location:420 → 598
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl10615
    Location:340 → 394
    sm_acid_XPC-like; small acidic domain of Xeroderma pigmentosum group C complementing protein and similar proteins

  2. XM_037070862.1 → XP_036926757.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X3

    Conserved Domains (3) summary
    cd10459
    Location:17 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    pfam04721
    Location:344 → 538
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl10615
    Location:217 → 279
    sm_acid_XPC-like; small acidic domain of Xeroderma pigmentosum group C complementing protein and similar proteins

  3. XM_037070860.1 → XP_036926755.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1

    Conserved Domains (4) summary
    cd10459
    Location:17 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    pfam01841
    Location:277 → 356
    Transglut_core; Transglutaminase-like superfamily
    pfam04721
    Location:459 → 653
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl10615
    Location:340 → 394
    sm_acid_XPC-like; small acidic domain of Xeroderma pigmentosum group C complementing protein and similar proteins

  4. XM_037070863.1 → XP_036926758.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X4

    Conserved Domains (4) summary
    cd10459
    Location:17 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    pfam01841
    Location:277 → 356
    Transglut_core; Transglutaminase-like superfamily
    cl10509
    Location:459 → 540
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl10615
    Location:340 → 394
    sm_acid_XPC-like; small acidic domain of Xeroderma pigmentosum group C complementing protein and similar proteins
Nucleotide Protein
Heading Accession and Version

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