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TMEM199 transmembrane protein 199 [ Sturnira hondurensis ]

Gene ID: 119003653, updated on 30-Mar-2024

Summary

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Gene symbol
TMEM199
Gene description
transmembrane protein 199
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See TMEM199 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023525833.1 (16416792..16419856)

NW_023525833.1Genomic Context describing neighboring genes Neighboring gene TNF alpha induced protein 1 Neighboring gene DNA polymerase delta interacting protein 2 Neighboring gene SEBOX homeobox Neighboring gene vitronectin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023525833 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 199

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023525833.1 Reference WHU_Shon_v2.1

    Range
    16416792..16419856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037070154.1 → XP_036926049.1  transmembrane protein 199 isoform X1

    Conserved Domains (1) summary
    pfam11712
    Location:78 → 199
    Vma12; Endoplasmic reticulum-based factor for assembly of V-ATPase

  2. XM_037070155.1 → XP_036926050.1  transmembrane protein 199 isoform X2

    Conserved Domains (1) summary
    pfam11712
    Location:78 → 180
    Vma12; Endoplasmic reticulum-based factor for assembly of V-ATPase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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