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SPHK1 sphingosine kinase 1 [ Sturnira hondurensis ]

Gene ID: 119000132, updated on 30-Mar-2024

Summary

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Gene symbol
SPHK1
Gene description
sphingosine kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See SPHK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023507242.1 (3590948..3597001, complement)

NW_023507242.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119000121 Neighboring gene rhomboid 5 homolog 2 Neighboring gene aralkylamine N-acetyltransferase Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene uncharacterized LOC119000157 Neighboring gene phosphoribosyl pyrophosphate synthetase associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023507242 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023507242.1 Reference WHU_Shon_v2.1

    Range
    3590948..3597001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037064987.1 → XP_036920882.1  sphingosine kinase 1 isoform X3

    Conserved Domains (1) summary
    PLN02958
    Location:77 → 416
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  2. XM_037064978.1 → XP_036920873.1  sphingosine kinase 1 isoform X2

    Conserved Domains (1) summary
    PLN02958
    Location:90 → 429
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  3. XM_037065003.1 → XP_036920898.1  sphingosine kinase 1 isoform X4

    Conserved Domains (1) summary
    PLN02958
    Location:9 → 348
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  4. XM_037064970.1 → XP_036920865.1  sphingosine kinase 1 isoform X1

    Conserved Domains (1) summary
    PLN02958
    Location:111 → 450
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  5. XM_037064994.1 → XP_036920889.1  sphingosine kinase 1 isoform X4

    Conserved Domains (1) summary
    PLN02958
    Location:9 → 348
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
Nucleotide Protein
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