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SUMF1 sulfatase modifying factor 1 [ Sturnira hondurensis ]

Gene ID: 118989406, updated on 30-Mar-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023512848.1 (17737955..17785293, complement)

NW_023512848.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat neuronal 1 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene basic helix-loop-helix family member e40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023512848 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023512848.1 Reference WHU_Shon_v2.1

    Range
    17737955..17785293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037049548.1 → XP_036905443.1  formylglycine-generating enzyme isoform X6

    Conserved Domains (1) summary
    cl23855
    Location:84 → 194
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  2. XM_037049547.1 → XP_036905442.1  formylglycine-generating enzyme isoform X5

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 335
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  3. XM_037049546.1 → XP_036905441.1  formylglycine-generating enzyme isoform X4

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 340
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  4. XM_037049544.1 → XP_036905439.1  formylglycine-generating enzyme isoform X2

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 360
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  5. XM_037049543.1 → XP_036905438.1  formylglycine-generating enzyme isoform X1

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 360
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  6. XM_037049545.1 → XP_036905440.1  formylglycine-generating enzyme isoform X3

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 334
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  7. XM_037049549.1 → XP_036905444.1  formylglycine-generating enzyme isoform X7

    Conserved Domains (1) summary
    pfam03781
    Location:84 → 331
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1
Nucleotide Protein
Heading Accession and Version

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