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OGDH oxoglutarate dehydrogenase [ Sturnira hondurensis ]

Gene ID: 118983470, updated on 30-Mar-2024

Summary

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Gene symbol
OGDH
Gene description
oxoglutarate dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See OGDH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023508968.1 (20561696..20608791)

NW_023508968.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 56 Neighboring gene transmembrane p24 trafficking protein 4 Neighboring gene zinc finger MIZ-type containing 2 Neighboring gene peptidylprolyl isomerase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023508968 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023508968.1 Reference WHU_Shon_v2.1

    Range
    20561696..20608791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037041019.1 → XP_036896914.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X2

    Conserved Domains (1) summary
    PRK09404
    Location:88 → 1050
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  2. XM_037041018.1 → XP_036896913.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

    Conserved Domains (1) summary
    PRK09404
    Location:88 → 1054
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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