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ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [ Sturnira hondurensis ]

Gene ID: 118978358, updated on 30-Mar-2024

Summary

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Gene symbol
ST8SIA5
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See ST8SIA5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023507930.1 (21855297..21899518, complement)

NW_023507930.1Genomic Context describing neighboring genes Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Neighboring gene lipoxygenase homology PLAT domains 1 Neighboring gene U2 spliceosomal RNA Neighboring gene 40S ribosomal protein S25-like Neighboring gene protein inhibitor of activated STAT 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023507930 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023507930.1 Reference WHU_Shon_v2.1

    Range
    21855297..21899518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037033814.1 → XP_036889709.1  alpha-2,8-sialyltransferase 8E isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:117 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_037033805.1 → XP_036889700.1  alpha-2,8-sialyltransferase 8E isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:153 → 406
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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