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SGCA sarcoglycan alpha [ Sturnira hondurensis ]

Gene ID: 118978117, updated on 30-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023528903.1 (1556026..1566437, complement)

NW_023528903.1Genomic Context describing neighboring genes Neighboring gene collagen type I alpha 1 chain Neighboring gene uncharacterized LOC118978119 Neighboring gene spermatid-specific linker histone H1-like protein Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene uncharacterized LOC118978116 Neighboring gene sterile alpha motif domain containing 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023528903 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023528903.1 Reference WHU_Shon_v2.1

    Range
    1556026..1566437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037033401.1 → XP_036889296.1  alpha-sarcoglycan

    Conserved Domains (1) summary
    pfam05510
    Location:27 → 354
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_037033400.1 → XP_036889295.1  alpha-sarcoglycan

    Conserved Domains (1) summary
    pfam05510
    Location:27 → 354
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

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