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ASGR2 asialoglycoprotein receptor 2 [ Sturnira hondurensis ]

Gene ID: 118974679, updated on 19-Jun-2024

Summary

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Gene symbol
ASGR2
Gene description
asialoglycoprotein receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnira hondurensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
Orthologs
human mouse all
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Genomic context

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See ASGR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023526997.1 (5466313..5481839)

NW_023526997.1Genomic Context describing neighboring genes Neighboring gene discs large MAGUK scaffold protein 4 Neighboring gene asialoglycoprotein receptor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023526997 Unplaced Scaffold Reference WHU_Shon_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological process involved in interspecies interaction between organisms IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asialoglycoprotein receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WHU_Shon_v2.1

Genomic

  1. NW_023526997.1 Reference WHU_Shon_v2.1

    Range
    5466313..5481839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037028227.1 → XP_036884122.1  asialoglycoprotein receptor 2 isoform X1

    Conserved Domains (2) summary
    cd03590
    Location:229 → 354
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:97 → 221
    Lectin_N; Hepatic lectin, N-terminal domain

  2. XM_037028229.1 → XP_036884124.1  asialoglycoprotein receptor 2 isoform X2

    Conserved Domains (2) summary
    cd03590
    Location:171 → 296
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:31 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  3. XM_037028228.1 → XP_036884123.1  asialoglycoprotein receptor 2 isoform X2

    Conserved Domains (2) summary
    cd03590
    Location:171 → 296
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:31 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  4. XM_037028230.1 → XP_036884125.1  asialoglycoprotein receptor 2 isoform X3

    Conserved Domains (2) summary
    cd03590
    Location:113 → 238
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:4 → 105
    Lectin_N; Hepatic lectin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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