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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Balaenoptera musculus (blue whale) ]

Gene ID: 118902996, updated on 20-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSBMSG00010003396
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mBalMus1.pri.v3 (GCF_009873245.2) 1 NC_045785.1 (115010609..115112064)

Chromosome 1 - NC_045785.1Genomic Context describing neighboring genes Neighboring gene CD5 molecule like Neighboring gene Fc receptor-like protein 2 Neighboring gene uncharacterized LOC118881747 Neighboring gene CD1d molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045785.1 Chromosome 1 Reference mBalMus1.pri.v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalMus1.pri.v3 Primary Assembly

Genomic

  1. NC_045785.1 Reference mBalMus1.pri.v3 Primary Assembly

    Range
    115010609..115112064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036867653.1 → XP_036723548.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8YM75, A0A8C0CGK3
    Related
    ENSBMSP00010004654.2, ENSBMST00010005114.2
    Conserved Domains (5) summary
    pfam13927
    Location:308 → 389
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:407 → 504
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain

  2. XM_036867654.1 → XP_036723549.1  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8YNX1, A0A8C0CGK3
    Related
    ENSBMSP00010004663.2, ENSBMST00010005125.2
    Conserved Domains (5) summary
    pfam13927
    Location:308 → 373
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:391 → 488
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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