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WASHC4 WASH complex subunit 4 [ Balaenoptera musculus (blue whale) ]

Gene ID: 118902680, updated on 20-Mar-2024

Summary

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Gene symbol
WASHC4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSBMSG00010007660
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See WASHC4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
37
Annotation release Status Assembly Chr Location
100 current mBalMus1.pri.v3 (GCF_009873245.2) 10 NC_045794.1 (87405890..87491655)

Chromosome 10 - NC_045794.1Genomic Context describing neighboring genes Neighboring gene NOP protein chaperone 1 Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene uncharacterized LOC118902303 Neighboring gene growth hormone-inducible transmembrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045794.1 Chromosome 10 Reference mBalMus1.pri.v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalMus1.pri.v3 Primary Assembly

Genomic

  1. NC_045794.1 Reference mBalMus1.pri.v3 Primary Assembly

    Range
    87405890..87491655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036867300.1 → XP_036723195.1  WASH complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A8B8YL69, A0A8C0CRQ3
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  2. XM_036867301.1 → XP_036723196.1  WASH complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A8B8YL69, A0A8C0CRQ3
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  3. XM_036867298.1 → XP_036723193.1  WASH complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A8B8YL69, A0A8C0CRQ3
    Related
    ENSBMSP00010010447.1, ENSBMST00010011609.2
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  4. XM_036867299.1 → XP_036723194.1  WASH complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A8B8YL69, A0A8C0CRQ3
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  5. XM_036867303.1 → XP_036723198.1  WASH complex subunit 4 isoform X3

    UniProtKB/TrEMBL
    A0A8B8YL75, A0A8C0CRQ3
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 904
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:921 → 1090
    WASH-7_C; WASH complex subunit 7, C-terminal

  6. XM_036867302.1 → XP_036723197.1  WASH complex subunit 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B8YL74, A0A8C0CRQ3
    Related
    ENSBMSP00010032744.1, ENSBMST00010037337.1
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 600
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
Heading Accession and Version

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