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ZBTB6 zinc finger and BTB domain containing 6 [ Balaenoptera musculus (blue whale) ]

Gene ID: 118897388, updated on 20-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
See related
EnsemblRapid:ENSBMSG00010002076
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
100 current mBalMus1.pri.v3 (GCF_009873245.2) 6 NC_045790.1 (104223542..104228056, complement)

Chromosome 6 - NC_045790.1Genomic Context describing neighboring genes Neighboring gene phosducin like Neighboring gene small nucleolar RNA SNORD90 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene liprin-alpha-1-like Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045790.1 Chromosome 6 Reference mBalMus1.pri.v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalMus1.pri.v3 Primary Assembly

Genomic

  1. NC_045790.1 Reference mBalMus1.pri.v3 Primary Assembly

    Range
    104223542..104228056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036856550.1 → XP_036712445.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A8C0C8W9
    Related
    ENSBMSP00010002763.1, ENSBMST00010003047.2
    Conserved Domains (5) summary
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:326 → 348
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:340 → 364
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:331 → 401
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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