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CD320 CD320 molecule [ Balaenoptera musculus (blue whale) ]

Gene ID: 118892808, updated on 20-Mar-2024

Summary

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Gene symbol
CD320
Gene description
CD320 molecule
See related
EnsemblRapid:ENSBMSG00010013391
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See CD320 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current mBalMus1.pri.v3 (GCF_009873245.2) 3 NC_045787.1 (165105285..165140963)

Chromosome 3 - NC_045787.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A7 Neighboring gene ribosomal protein S28 Neighboring gene ceramide synthase 4 Neighboring gene 60S ribosomal protein L14-like Neighboring gene fibrillin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045787.1 Chromosome 3 Reference mBalMus1.pri.v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis involved in cholesterol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD320 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalMus1.pri.v3 Primary Assembly

Genomic

  1. NC_045787.1 Reference mBalMus1.pri.v3 Primary Assembly

    Range
    165105285..165140963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036847767.1 → XP_036703662.1  CD320 antigen isoform X2

    UniProtKB/TrEMBL
    A0A8B8X227
    Conserved Domains (1) summary
    cd00112
    Location:131 → 166
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_036847768.1 → XP_036703663.1  CD320 antigen isoform X3

    UniProtKB/TrEMBL
    A0A8B8X246
    Conserved Domains (1) summary
    cd00112
    Location:131 → 166
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  3. XM_036847766.1 → XP_036703661.1  CD320 antigen isoform X1

    UniProtKB/TrEMBL
    A0A8B8X2E2
    Related
    ENSBMSP00010018459.1, ENSBMST00010020399.2
    Conserved Domains (1) summary
    cd00112
    Location:131 → 166
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
Nucleotide Protein
Heading Accession and Version

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