U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PNPLA4 patatin like phospholipase domain containing 4 [ Balaenoptera musculus (blue whale) ]

Gene ID: 118888232, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
See related
EnsemblRapid:ENSBMSG00010016004
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PNPLA4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
100 current mBalMus1.pri.v3 (GCF_009873245.2) X NC_045806.1 (5192854..5301769, complement)

Chromosome X - NC_045806.1Genomic Context describing neighboring genes Neighboring gene pseudouridine 5'-phosphatase Neighboring gene prefoldin subunit 4-like Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC118888234 Neighboring gene small nucleolar RNA SNORD82

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045806.1 Chromosome X Reference mBalMus1.pri.v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalMus1.pri.v3 Primary Assembly

Genomic

  1. NC_045806.1 Reference mBalMus1.pri.v3 Primary Assembly

    Range
    5192854..5301769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036839206.1 → XP_036695101.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8B8WD73, A0A8C0DJL7
    Conserved Domains (1) summary
    cd07222
    Location:18 → 224
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_036839209.1 → XP_036695104.1  patatin-like phospholipase domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A8B8WD79, A0A8C0DJL7
    Conserved Domains (1) summary
    cd07222
    Location:18 → 223
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  3. XM_036839208.1 → XP_036695103.1  patatin-like phospholipase domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A8B8WD77, A0A8C0DJL7
    Conserved Domains (1) summary
    cd07222
    Location:18 → 226
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  4. XM_036839207.1 → XP_036695102.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8B8WD46, A0A8C0DJL7
    Conserved Domains (1) summary
    cd07222
    Location:18 → 223
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  5. XM_036839211.1 → XP_036695106.1  patatin-like phospholipase domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A8B8WD78
    Conserved Domains (1) summary
    cl11396
    Location:1 → 162
    Patatin_and_cPLA2; Patatins and Phospholipases

  6. XM_036839212.1 → XP_036695107.1  patatin-like phospholipase domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A8B8WD78
    Conserved Domains (1) summary
    cl11396
    Location:1 → 162
    Patatin_and_cPLA2; Patatins and Phospholipases

  7. XM_036839204.1 → XP_036695099.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8B8WD74, A0A8C0DJL7
    Related
    ENSBMSP00010022071.2, ENSBMST00010024327.2
    Conserved Domains (1) summary
    cd07222
    Location:18 → 262
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  8. XM_036839205.1 → XP_036695100.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B8WF98, A0A8C0DJL7
    Conserved Domains (1) summary
    cd07222
    Location:12 → 251
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  9. XM_036839210.1 → XP_036695105.1  patatin-like phospholipase domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A8B8WD78
    Related
    ENSBMSP00010034410.1, ENSBMST00010035723.1
    Conserved Domains (1) summary
    cl11396
    Location:1 → 162
    Patatin_and_cPLA2; Patatins and Phospholipases

RNA

  1. XR_005018280.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.