U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

plecb plectin b [ Colossoma macropomum (tambaqui) ]

Gene ID: 118819884, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
plecb
Gene description
plectin b
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See plecb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494785.1 (23988935..24135886)

NW_023494785.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3, subunit E, a Neighboring gene R-spondin 2 Neighboring gene solute carrier family 52, riboflavin transporter, member 3-B-like Neighboring gene microtubule actin crosslinking factor 1b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023494785 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494785.1 Reference Colossoma_macropomum

    Range
    23988935..24135886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036587935.1 → XP_036443828.1  plectin isoform X10

    Conserved Domains (11) summary
    PTZ00121
    Location:1452 → 2246
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:570 → 664
    SPEC; Spectrin repeats
    smart00250
    Location:3121 → 3157
    PLEC; Plectin repeat
    cd00176
    Location:665 → 855
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1854 → 2668
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4062 → 4101
    Plectin; Plectin repeat
    pfam17902
    Location:841 → 907
    SH3_10; SH3 domain
    pfam18373
    Location:942 → 1019
    Spectrin_like; Spectrin like domain
    cd21188
    Location:68 → 189
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:206 → 311
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3731 → 3827
    TfuA; TfuA-like protein

  2. XM_036588085.1 → XP_036443978.1  plectin isoform X27

    Conserved Domains (11) summary
    PTZ00121
    Location:1418 → 2212
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:536 → 630
    SPEC; Spectrin repeats
    smart00250
    Location:3087 → 3123
    PLEC; Plectin repeat
    cd00176
    Location:631 → 821
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1820 → 2634
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4028 → 4067
    Plectin; Plectin repeat
    pfam17902
    Location:807 → 873
    SH3_10; SH3 domain
    pfam18373
    Location:908 → 985
    Spectrin_like; Spectrin like domain
    cd21188
    Location:34 → 155
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:172 → 277
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3697 → 3793
    TfuA; TfuA-like protein

  3. XM_036587969.1 → XP_036443862.1  plectin isoform X14

    Conserved Domains (11) summary
    PTZ00121
    Location:1413 → 2207
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:531 → 625
    SPEC; Spectrin repeats
    smart00250
    Location:3082 → 3118
    PLEC; Plectin repeat
    cd00176
    Location:626 → 816
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1815 → 2629
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4023 → 4062
    Plectin; Plectin repeat
    pfam17902
    Location:802 → 868
    SH3_10; SH3 domain
    pfam18373
    Location:903 → 980
    Spectrin_like; Spectrin like domain
    cd21188
    Location:34 → 150
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:167 → 272
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3692 → 3788
    TfuA; TfuA-like protein

  4. XM_036588005.1 → XP_036443898.1  plectin isoform X18

    Conserved Domains (11) summary
    PTZ00121
    Location:1403 → 2197
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:521 → 615
    SPEC; Spectrin repeats
    smart00250
    Location:3072 → 3108
    PLEC; Plectin repeat
    cd00176
    Location:616 → 806
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1805 → 2619
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4013 → 4052
    Plectin; Plectin repeat
    pfam17902
    Location:792 → 858
    SH3_10; SH3 domain
    pfam18373
    Location:893 → 970
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19 → 140
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:157 → 262
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3682 → 3778
    TfuA; TfuA-like protein

  5. XM_036588021.1 → XP_036443914.1  plectin isoform X20

    Conserved Domains (11) summary
    PTZ00121
    Location:1398 → 2192
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:516 → 610
    SPEC; Spectrin repeats
    smart00250
    Location:3067 → 3103
    PLEC; Plectin repeat
    cd00176
    Location:611 → 801
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1800 → 2614
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4008 → 4047
    Plectin; Plectin repeat
    pfam17902
    Location:787 → 853
    SH3_10; SH3 domain
    pfam18373
    Location:888 → 965
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19 → 135
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:152 → 257
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3677 → 3773
    TfuA; TfuA-like protein

  6. XM_036588032.1 → XP_036443925.1  plectin isoform X21

    Conserved Domains (11) summary
    PTZ00121
    Location:1397 → 2191
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:515 → 609
    SPEC; Spectrin repeats
    smart00250
    Location:3066 → 3102
    PLEC; Plectin repeat
    cd00176
    Location:610 → 800
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1799 → 2613
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4007 → 4046
    Plectin; Plectin repeat
    pfam17902
    Location:786 → 852
    SH3_10; SH3 domain
    pfam18373
    Location:887 → 964
    Spectrin_like; Spectrin like domain
    cd21188
    Location:13 → 134
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:151 → 256
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3676 → 3772
    TfuA; TfuA-like protein

  7. XM_036588048.1 → XP_036443941.1  plectin isoform X23

    Conserved Domains (11) summary
    PTZ00121
    Location:1392 → 2186
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:510 → 604
    SPEC; Spectrin repeats
    smart00250
    Location:3061 → 3097
    PLEC; Plectin repeat
    cd00176
    Location:605 → 795
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1794 → 2608
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4002 → 4041
    Plectin; Plectin repeat
    pfam17902
    Location:781 → 847
    SH3_10; SH3 domain
    pfam18373
    Location:882 → 959
    Spectrin_like; Spectrin like domain
    cd21188
    Location:13 → 129
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:146 → 251
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3671 → 3767
    TfuA; TfuA-like protein

  8. XM_036587996.1 → XP_036443889.1  plectin isoform X17

    Conserved Domains (11) summary
    PTZ00121
    Location:1403 → 2197
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:521 → 615
    SPEC; Spectrin repeats
    smart00250
    Location:3072 → 3108
    PLEC; Plectin repeat
    cd00176
    Location:616 → 806
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1805 → 2619
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4013 → 4052
    Plectin; Plectin repeat
    pfam17902
    Location:792 → 858
    SH3_10; SH3 domain
    pfam18373
    Location:893 → 970
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19 → 140
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:157 → 262
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3682 → 3778
    TfuA; TfuA-like protein

  9. XM_036588012.1 → XP_036443905.1  plectin isoform X19

    Conserved Domains (11) summary
    PTZ00121
    Location:1398 → 2192
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:516 → 610
    SPEC; Spectrin repeats
    smart00250
    Location:3067 → 3103
    PLEC; Plectin repeat
    cd00176
    Location:611 → 801
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1800 → 2614
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4008 → 4047
    Plectin; Plectin repeat
    pfam17902
    Location:787 → 853
    SH3_10; SH3 domain
    pfam18373
    Location:888 → 965
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19 → 135
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:152 → 257
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3677 → 3773
    TfuA; TfuA-like protein

  10. XM_036587856.1 → XP_036443749.1  plectin isoform X1

    Conserved Domains (13) summary
    PTZ00121
    Location:3152 → 4002
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1906 → 2000
    SPEC; Spectrin repeats
    smart00250
    Location:4457 → 4493
    PLEC; Plectin repeat
    cd00176
    Location:2001 → 2191
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2745 → 3458
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2297 → 3071
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5398 → 5437
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2177 → 2243
    SH3_10; SH3 domain
    pfam18373
    Location:2278 → 2355
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1525
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1542 → 1647
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5067 → 5163
    TfuA; TfuA-like protein

  11. XM_036587927.1 → XP_036443820.1  plectin isoform X9

    Conserved Domains (12) summary
    smart00150
    Location:1906 → 2000
    SPEC; Spectrin repeats
    smart00250
    Location:3339 → 3375
    PLEC; Plectin repeat
    COG0419
    Location:2405 → 2872
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00176
    Location:2001 → 2191
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00681
    Location:4280 → 4319
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2177 → 2243
    SH3_10; SH3 domain
    pfam18373
    Location:2278 → 2355
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1525
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    NF033913
    Location:399 → 654
    fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA
    cl00030
    Location:1542 → 1647
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3949 → 4045
    TfuA; TfuA-like protein

  12. XM_036587865.1 → XP_036443758.1  plectin isoform X2

    Conserved Domains (13) summary
    PTZ00121
    Location:3148 → 3998
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1902 → 1996
    SPEC; Spectrin repeats
    smart00250
    Location:4453 → 4489
    PLEC; Plectin repeat
    cd00176
    Location:1997 → 2187
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2741 → 3454
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2293 → 3067
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5394 → 5433
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2173 → 2239
    SH3_10; SH3 domain
    pfam18373
    Location:2274 → 2351
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1525
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1538 → 1643
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5063 → 5159
    TfuA; TfuA-like protein

  13. XM_036587893.1 → XP_036443786.1  plectin isoform X5

    Conserved Domains (13) summary
    PTZ00121
    Location:3140 → 3990
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1894 → 1988
    SPEC; Spectrin repeats
    smart00250
    Location:4445 → 4481
    PLEC; Plectin repeat
    cd00176
    Location:1989 → 2179
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2733 → 3446
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2285 → 3059
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5386 → 5425
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2165 → 2231
    SH3_10; SH3 domain
    pfam18373
    Location:2266 → 2343
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1513
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1530 → 1635
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5055 → 5151
    TfuA; TfuA-like protein

  14. XM_036587902.1 → XP_036443795.1  plectin isoform X6

    Conserved Domains (13) summary
    PTZ00121
    Location:3136 → 3986
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1890 → 1984
    SPEC; Spectrin repeats
    smart00250
    Location:4441 → 4477
    PLEC; Plectin repeat
    cd00176
    Location:1985 → 2175
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2729 → 3442
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2281 → 3055
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5382 → 5421
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2161 → 2227
    SH3_10; SH3 domain
    pfam18373
    Location:2262 → 2339
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1513
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1526 → 1631
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5051 → 5147
    TfuA; TfuA-like protein

  15. XM_036587874.1 → XP_036443767.1  plectin isoform X3

    Conserved Domains (13) summary
    PTZ00121
    Location:3147 → 3997
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1901 → 1995
    SPEC; Spectrin repeats
    smart00250
    Location:4452 → 4488
    PLEC; Plectin repeat
    cd00176
    Location:1996 → 2186
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2740 → 3453
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2292 → 3066
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5393 → 5432
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2172 → 2238
    SH3_10; SH3 domain
    pfam18373
    Location:2273 → 2350
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1520
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1537 → 1642
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5062 → 5158
    TfuA; TfuA-like protein

  16. XM_036587883.1 → XP_036443776.1  plectin isoform X4

    Conserved Domains (13) summary
    PTZ00121
    Location:3143 → 3993
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1897 → 1991
    SPEC; Spectrin repeats
    smart00250
    Location:4448 → 4484
    PLEC; Plectin repeat
    cd00176
    Location:1992 → 2182
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2736 → 3449
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2288 → 3062
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5389 → 5428
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2168 → 2234
    SH3_10; SH3 domain
    pfam18373
    Location:2269 → 2346
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1520
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1533 → 1638
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5058 → 5154
    TfuA; TfuA-like protein

  17. XM_036587912.1 → XP_036443805.1  plectin isoform X7

    Conserved Domains (13) summary
    PTZ00121
    Location:3135 → 3985
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1889 → 1983
    SPEC; Spectrin repeats
    smart00250
    Location:4440 → 4476
    PLEC; Plectin repeat
    cd00176
    Location:1984 → 2174
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2728 → 3441
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2280 → 3054
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5381 → 5420
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2160 → 2226
    SH3_10; SH3 domain
    pfam18373
    Location:2261 → 2338
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1508
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1525 → 1630
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5050 → 5146
    TfuA; TfuA-like protein

  18. XM_036587920.1 → XP_036443813.1  plectin isoform X8

    Conserved Domains (13) summary
    PTZ00121
    Location:3131 → 3981
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:1885 → 1979
    SPEC; Spectrin repeats
    smart00250
    Location:4436 → 4472
    PLEC; Plectin repeat
    cd00176
    Location:1980 → 2170
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    TIGR02168
    Location:2724 → 3437
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:2276 → 3050
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:5377 → 5416
    Plectin; Plectin repeat
    pfam03501
    Location:7 → 99
    S10_plectin; Plectin/S10 domain
    pfam17902
    Location:2156 → 2222
    SH3_10; SH3 domain
    pfam18373
    Location:2257 → 2334
    Spectrin_like; Spectrin like domain
    cd21188
    Location:1404 → 1508
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:1521 → 1626
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:5046 → 5142
    TfuA; TfuA-like protein

  19. XM_036588040.1 → XP_036443933.1  plectin isoform X22

    Conserved Domains (11) summary
    PTZ00121
    Location:1393 → 2187
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:511 → 605
    SPEC; Spectrin repeats
    smart00250
    Location:3062 → 3098
    PLEC; Plectin repeat
    cd00176
    Location:606 → 796
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1795 → 2609
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4003 → 4042
    Plectin; Plectin repeat
    pfam17902
    Location:782 → 848
    SH3_10; SH3 domain
    pfam18373
    Location:883 → 960
    Spectrin_like; Spectrin like domain
    cd21188
    Location:9 → 130
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:147 → 252
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3672 → 3768
    TfuA; TfuA-like protein

  20. XM_036588057.1 → XP_036443950.1  plectin isoform X24

    Conserved Domains (11) summary
    PTZ00121
    Location:1389 → 2183
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:507 → 601
    SPEC; Spectrin repeats
    smart00250
    Location:3058 → 3094
    PLEC; Plectin repeat
    cd00176
    Location:602 → 792
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1791 → 2605
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:3999 → 4038
    Plectin; Plectin repeat
    pfam17902
    Location:778 → 844
    SH3_10; SH3 domain
    pfam18373
    Location:879 → 956
    Spectrin_like; Spectrin like domain
    cd21188
    Location:9 → 130
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:143 → 248
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3668 → 3764
    TfuA; TfuA-like protein

  21. XM_036588074.1 → XP_036443967.1  plectin isoform X26

    Conserved Domains (11) summary
    PTZ00121
    Location:1377 → 2171
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:495 → 589
    SPEC; Spectrin repeats
    smart00250
    Location:3046 → 3082
    PLEC; Plectin repeat
    cd00176
    Location:590 → 780
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1779 → 2593
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:3987 → 4026
    Plectin; Plectin repeat
    pfam17902
    Location:766 → 832
    SH3_10; SH3 domain
    pfam18373
    Location:867 → 944
    Spectrin_like; Spectrin like domain
    cd21188
    Location:9 → 118
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:131 → 236
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3656 → 3752
    TfuA; TfuA-like protein

  22. XM_036588065.1 → XP_036443958.1  plectin isoform X25

    Conserved Domains (11) summary
    PTZ00121
    Location:1388 → 2182
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:506 → 600
    SPEC; Spectrin repeats
    smart00250
    Location:3057 → 3093
    PLEC; Plectin repeat
    cd00176
    Location:601 → 791
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1790 → 2604
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:3998 → 4037
    Plectin; Plectin repeat
    pfam17902
    Location:777 → 843
    SH3_10; SH3 domain
    pfam18373
    Location:878 → 955
    Spectrin_like; Spectrin like domain
    cd21188
    Location:9 → 125
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:142 → 247
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3667 → 3763
    TfuA; TfuA-like protein

  23. XM_036587943.1 → XP_036443836.1  plectin isoform X11

    Conserved Domains (11) summary
    PTZ00121
    Location:1426 → 2220
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:544 → 638
    SPEC; Spectrin repeats
    smart00250
    Location:3095 → 3131
    PLEC; Plectin repeat
    cd00176
    Location:639 → 829
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1828 → 2642
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4036 → 4075
    Plectin; Plectin repeat
    pfam17902
    Location:815 → 881
    SH3_10; SH3 domain
    pfam18373
    Location:916 → 993
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42 → 163
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:180 → 285
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3705 → 3801
    TfuA; TfuA-like protein

  24. XM_036587951.1 → XP_036443844.1  plectin isoform X12

    Conserved Domains (11) summary
    PTZ00121
    Location:1421 → 2215
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:539 → 633
    SPEC; Spectrin repeats
    smart00250
    Location:3090 → 3126
    PLEC; Plectin repeat
    cd00176
    Location:634 → 824
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1823 → 2637
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4031 → 4070
    Plectin; Plectin repeat
    pfam17902
    Location:810 → 876
    SH3_10; SH3 domain
    pfam18373
    Location:911 → 988
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42 → 158
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:175 → 280
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3700 → 3796
    TfuA; TfuA-like protein

  25. XM_036587960.1 → XP_036443853.1  plectin isoform X13

    Conserved Domains (11) summary
    PTZ00121
    Location:1417 → 2211
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:535 → 629
    SPEC; Spectrin repeats
    smart00250
    Location:3086 → 3122
    PLEC; Plectin repeat
    cd00176
    Location:630 → 820
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1819 → 2633
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4027 → 4066
    Plectin; Plectin repeat
    pfam17902
    Location:806 → 872
    SH3_10; SH3 domain
    pfam18373
    Location:907 → 984
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42 → 158
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:171 → 276
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3696 → 3792
    TfuA; TfuA-like protein

  26. XM_036587979.1 → XP_036443872.1  plectin isoform X15

    Conserved Domains (11) summary
    PTZ00121
    Location:1409 → 2203
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:527 → 621
    SPEC; Spectrin repeats
    smart00250
    Location:3078 → 3114
    PLEC; Plectin repeat
    cd00176
    Location:622 → 812
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1811 → 2625
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4019 → 4058
    Plectin; Plectin repeat
    pfam17902
    Location:798 → 864
    SH3_10; SH3 domain
    pfam18373
    Location:899 → 976
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42 → 146
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:163 → 268
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3688 → 3784
    TfuA; TfuA-like protein

  27. XM_036587988.1 → XP_036443881.1  plectin isoform X16

    Conserved Domains (11) summary
    PTZ00121
    Location:1405 → 2199
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:523 → 617
    SPEC; Spectrin repeats
    smart00250
    Location:3074 → 3110
    PLEC; Plectin repeat
    cd00176
    Location:618 → 808
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam02463
    Location:1807 → 2621
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam00681
    Location:4015 → 4054
    Plectin; Plectin repeat
    pfam17902
    Location:794 → 860
    SH3_10; SH3 domain
    pfam18373
    Location:895 → 972
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42 → 146
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:159 → 264
    CH_SF; calponin homology (CH) domain superfamily
    cl19839
    Location:3684 → 3780
    TfuA; TfuA-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases