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si:dkeyp-82a1.6 torsin-1A-interacting protein 1 [ Colossoma macropomum (tambaqui) ]

Gene ID: 118813730, updated on 20-Mar-2024

Summary

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Gene symbol
si:dkeyp-82a1.6
Gene description
torsin-1A-interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-82a1.6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494793.1 (32799192..32804023, complement)

NW_023494793.1Genomic Context describing neighboring genes Neighboring gene putative ferric-chelate reductase 1 Neighboring gene cell wall protein DAN4-like Neighboring gene uncharacterized LOC118813731 Neighboring gene aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023494793 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494793.1 Reference Colossoma_macropomum

    Range
    32799192..32804023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036579228.1 → XP_036435121.1  torsin-1A-interacting protein 1 isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:326 → 528
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_036579227.1 → XP_036435120.1  torsin-1A-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:327 → 529
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

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