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gxylt1a glucoside xylosyltransferase 1a [ Colossoma macropomum (tambaqui) ]

Gene ID: 118811809, updated on 20-Mar-2024

Summary

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Gene symbol
gxylt1a
Gene description
glucoside xylosyltransferase 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
zebrafish all
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Genomic context

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See gxylt1a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494792.1 (17241796..17254211)

NW_023494792.1Genomic Context describing neighboring genes Neighboring gene periphilin-1 Neighboring gene YY1-associated factor 2-like Neighboring gene PDZ domain-containing RING finger protein 4-like Neighboring gene contactin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023494792 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494792.1 Reference Colossoma_macropomum

    Range
    17241796..17254211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036576305.1 → XP_036432198.1  glucoside xylosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cd06430
    Location:113 → 415
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  2. XM_036576306.1 → XP_036432199.1  glucoside xylosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cd06430
    Location:82 → 384
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  3. XM_036576307.1 → XP_036432200.1  glucoside xylosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cd06430
    Location:71 → 373
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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