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washc4 WASH complex subunit 4 [ Colossoma macropomum (tambaqui) ]

Gene ID: 118811741, updated on 20-Mar-2024

Summary

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Gene symbol
washc4
Gene description
WASH complex subunit 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
human zebrafish all
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Genomic context

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See washc4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494792.1 (15290405..15306293, complement)

NW_023494792.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 10 Neighboring gene CCR4-NOT transcription complex, subunit 2 Neighboring gene solute carrier family 41 member 2a Neighboring gene uncharacterized si:ch211-106e7.2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023494792 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494792.1 Reference Colossoma_macropomum

    Range
    15290405..15306293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036576174.1 → XP_036432067.1  WASH complex subunit 4 isoform X2

    Conserved Domains (3) summary
    pfam14744
    Location:661 → 1005
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:88 → 654
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:1022 → 1191
    WASH-7_C; WASH complex subunit 7, C-terminal

  2. XM_036576173.1 → XP_036432066.1  WASH complex subunit 4 isoform X1

    Conserved Domains (3) summary
    pfam14744
    Location:661 → 1005
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:88 → 654
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:1022 → 1191
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
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