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LOC118809448 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Colossoma macropomum (tambaqui) ]

Gene ID: 118809448, updated on 20-Mar-2024

Summary

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Gene symbol
LOC118809448
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
zebrafish all
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Genomic context

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See LOC118809448 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494784.1 (20765025..20780575)

NW_023494784.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA ACA64 Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67 Neighboring gene calcium channel, voltage-dependent, beta 4a subunit Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023494784 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494784.1 Reference Colossoma_macropomum

    Range
    20765025..20780575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036572792.1 → XP_036428685.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:250 → 483
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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