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tlr2 toll-like receptor 2 [ Colossoma macropomum (tambaqui) ]

Gene ID: 118802155, updated on 20-Mar-2024

Summary

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Gene symbol
tlr2
Gene description
toll-like receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
human zebrafish all
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Genomic context

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See tlr2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023495461.1 (24502..27037)

NW_023495461.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 2 Neighboring gene toll-like receptor 2 Neighboring gene protein kinase C, beta a Neighboring gene voltage-dependent calcium channel gamma-3 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023495461 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023495461.1 Reference Colossoma_macropomum

    Range
    24502..27037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036562631.1 → XP_036418524.1  toll-like receptor 2

    Conserved Domains (4) summary
    PRK15370
    Location:346 → 542
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:635 → 775
    TIR; Toll - interleukin 1 - resistance
    sd00033
    Location:46 → 69
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:68 → 127
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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